Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 EEF1DP4-201ENST00000446006 880 ntBASIC17.69■□□□□ 0.42
CLCN3P51790 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN3P51790 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 AC093004.1-201ENST00000508850 424 ntBASIC17.69■□□□□ 0.42
CLCN3P51790 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CLCN3P51790 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
CLCN3P51790 TPRX2P-201ENST00000535362 881 ntBASIC17.69■□□□□ 0.42
CLCN3P51790 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CLCN3P51790 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN3P51790 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.69■□□□□ 0.42
CLCN3P51790 AL358472.5-202ENST00000641448 1267 ntBASIC17.69■□□□□ 0.42
CLCN3P51790 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN3P51790 AC134407.2-201ENST00000625089 1978 ntBASIC17.69■□□□□ 0.42
CLCN3P51790 AC006449.6-201ENST00000612330 2296 ntBASIC17.69■□□□□ 0.42
CLCN3P51790 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
CLCN3P51790 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLCN3P51790 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN3P51790 DGCR5-201ENST00000399539 862 ntBASIC17.68■□□□□ 0.42
CLCN3P51790 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 COX5BP8-201ENST00000416911 349 ntBASIC17.68■□□□□ 0.42
CLCN3P51790 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CLCN3P51790 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCN3P51790 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.68■□□□□ 0.42
CLCN3P51790 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCN3P51790 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCN3P51790 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 SLC7A15P-201ENST00000424028 1363 ntBASIC17.67■□□□□ 0.42
CLCN3P51790 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN3P51790 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN3P51790 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.67■□□□□ 0.42
CLCN3P51790 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCN3P51790 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN3P51790 NME2P1-201ENST00000426182 414 ntBASIC17.67■□□□□ 0.42
CLCN3P51790 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.67■□□□□ 0.42
CLCN3P51790 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCN3P51790 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLCN3P51790 AC008494.3-201ENST00000606615 944 ntBASIC17.67■□□□□ 0.42
CLCN3P51790 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 AC007431.3-201ENST00000623221 587 ntBASIC17.67■□□□□ 0.42
CLCN3P51790 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN3P51790 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN3P51790 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN3P51790 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.67■□□□□ 0.42
CLCN3P51790 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCN3P51790 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN3P51790 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN3P51790 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms