Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AL450472.2-201ENST00000603663 1156 ntBASIC16.15■□□□□ 0.18
CSNK1DP48730 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1DP48730 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1DP48730 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1DP48730 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1DP48730 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1DP48730 AC112504.1-201ENST00000623415 1841 ntBASIC16.15■□□□□ 0.18
CSNK1DP48730 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.14■□□□□ 0.18
CSNK1DP48730 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1DP48730 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CSNK1DP48730 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.14■□□□□ 0.17
CSNK1DP48730 BCRP1-201ENST00000444246 691 ntBASIC16.14■□□□□ 0.17
CSNK1DP48730 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.14■□□□□ 0.17
CSNK1DP48730 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CSNK1DP48730 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.14■□□□□ 0.17
CSNK1DP48730 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1DP48730 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1DP48730 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1DP48730 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1DP48730 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1DP48730 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.13■□□□□ 0.17
CSNK1DP48730 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 AC026691.1-201ENST00000602502 2017 ntBASIC16.13■□□□□ 0.17
CSNK1DP48730 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CSNK1DP48730 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 MRPS18AP1-201ENST00000414458 589 ntBASIC16.13■□□□□ 0.17
CSNK1DP48730 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1DP48730 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AC025048.3-201ENST00000590609 569 ntBASIC16.13■□□□□ 0.17
CSNK1DP48730 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AC005702.4-201ENST00000618393 416 ntBASIC16.13■□□□□ 0.17
CSNK1DP48730 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CSNK1DP48730 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.13■□□□□ 0.17
CSNK1DP48730 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 AL391005.1-201ENST00000623953 2435 ntBASIC16.13■□□□□ 0.17
CSNK1DP48730 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1DP48730 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
CSNK1DP48730 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1DP48730 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1DP48730 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms