Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 AC005622.1-201ENST00000636801 1703 ntBASIC17.31■□□□□ 0.36
SSR1P43307 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR1P43307 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SSR1P43307 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SSR1P43307 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.31■□□□□ 0.36
SSR1P43307 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SSR1P43307 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.31■□□□□ 0.36
SSR1P43307 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.31■□□□□ 0.36
SSR1P43307 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 SLC25A6P4-201ENST00000586535 553 ntBASIC17.31■□□□□ 0.36
SSR1P43307 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 AL645728.2-201ENST00000641974 660 ntBASIC17.31■□□□□ 0.36
SSR1P43307 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SSR1P43307 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 AC007950.2-201ENST00000615045 2347 ntBASIC17.31■□□□□ 0.36
SSR1P43307 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSR1P43307 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.3■□□□□ 0.36
SSR1P43307 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 RNU1-129P-201ENST00000384064 167 ntBASIC17.3■□□□□ 0.36
SSR1P43307 IGLL3P-201ENST00000412472 434 ntBASIC17.3■□□□□ 0.36
SSR1P43307 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 RNA5SP419-201ENST00000515908 135 ntBASIC17.3■□□□□ 0.36
SSR1P43307 U1.21-201ENST00000580816 167 ntBASIC17.3■□□□□ 0.36
SSR1P43307 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 AC021097.1-201ENST00000607902 574 ntBASIC17.3■□□□□ 0.36
SSR1P43307 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.3■□□□□ 0.36
SSR1P43307 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSR1P43307 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.3■□□□□ 0.36
SSR1P43307 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SSR1P43307 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSR1P43307 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 PRAL-201ENST00000624952 3286 ntBASIC17.29■□□□□ 0.36
SSR1P43307 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSR1P43307 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 HLA-A-201ENST00000376802 1334 ntBASIC17.29■□□□□ 0.36
SSR1P43307 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SSR1P43307 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.29■□□□□ 0.36
SSR1P43307 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.29■□□□□ 0.36
SSR1P43307 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.29■□□□□ 0.36
SSR1P43307 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.29■□□□□ 0.36
SSR1P43307 AC010507.1-201ENST00000633895 436 ntBASIC17.29■□□□□ 0.36
SSR1P43307 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.29■□□□□ 0.36
SSR1P43307 AC097376.2-205ENST00000610159 5334 ntBASIC17.29■□□□□ 0.36
SSR1P43307 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 AC010491.1-201ENST00000563101 2797 ntBASIC17.29■□□□□ 0.36
SSR1P43307 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSR1P43307 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms