Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 MIR661-201ENST00000384842 89 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.02■□□□□ 0.32
GRIK1P39086 SPDYE17-201ENST00000412399 783 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
GRIK1P39086 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 FAM207CP-201ENST00000443486 507 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 AC009477.1-201ENST00000452936 217 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 SERBP1P3-201ENST00000459980 809 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GRIK1P39086 RN7SL618P-201ENST00000477850 296 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 AL844908.2-201ENST00000609461 460 ntBASIC17.02■□□□□ 0.32
GRIK1P39086 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.02■□□□□ 0.32
GRIK1P39086 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
GRIK1P39086 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GRIK1P39086 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GRIK1P39086 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.02■□□□□ 0.31
GRIK1P39086 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.02■□□□□ 0.31
GRIK1P39086 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
GRIK1P39086 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GRIK1P39086 CYP4F24P-201ENST00000586049 1580 ntBASIC17.02■□□□□ 0.31
GRIK1P39086 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 AL662844.4-201ENST00000606367 2838 ntBASIC17.01■□□□□ 0.31
GRIK1P39086 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.01■□□□□ 0.31
GRIK1P39086 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 TERF1P3-201ENST00000505638 1227 ntBASIC17.01■□□□□ 0.31
GRIK1P39086 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.01■□□□□ 0.31
GRIK1P39086 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.01■□□□□ 0.31
GRIK1P39086 AC008761.3-201ENST00000624803 892 ntBASIC17.01■□□□□ 0.31
GRIK1P39086 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.01■□□□□ 0.31
GRIK1P39086 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GRIK1P39086 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 AC092364.2-201ENST00000596710 2692 ntBASIC17.01■□□□□ 0.31
GRIK1P39086 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GRIK1P39086 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GRIK1P39086 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17■□□□□ 0.31
GRIK1P39086 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17■□□□□ 0.31
GRIK1P39086 AC245100.5-201ENST00000452108 331 ntBASIC17■□□□□ 0.31
GRIK1P39086 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17■□□□□ 0.31
GRIK1P39086 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
GRIK1P39086 AL512361.1-201ENST00000554200 418 ntBASIC17■□□□□ 0.31
GRIK1P39086 AC009407.1-201ENST00000568958 598 ntBASIC17■□□□□ 0.31
GRIK1P39086 AL033527.5-202ENST00000641632 1098 ntBASIC17■□□□□ 0.31
GRIK1P39086 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
GRIK1P39086 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms