Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.37■□□□□ 0.05
PTPN6P29350 AC109635.5-201ENST00000533593 962 ntBASIC15.37■□□□□ 0.05
PTPN6P29350 AC006538.3-201ENST00000612495 578 ntBASIC15.37■□□□□ 0.05
PTPN6P29350 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 DBET-201ENST00000630918 3363 ntBASIC15.37■□□□□ 0.05
PTPN6P29350 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.37■□□□□ 0.05
PTPN6P29350 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.37■□□□□ 0.05
PTPN6P29350 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PTPN6P29350 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 AC020658.6-201ENST00000623564 1870 ntBASIC15.36■□□□□ 0.05
PTPN6P29350 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 MIR1233-2-201ENST00000408138 82 ntBASIC15.36■□□□□ 0.05
PTPN6P29350 MIR1233-1-201ENST00000408722 82 ntBASIC15.36■□□□□ 0.05
PTPN6P29350 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.36■□□□□ 0.05
PTPN6P29350 AC112482.1-201ENST00000492080 688 ntBASIC15.36■□□□□ 0.05
PTPN6P29350 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PTPN6P29350 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.36■□□□□ 0.05
PTPN6P29350 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 MIR3687-2-201ENST00000577708 61 ntBASIC15.36■□□□□ 0.05
PTPN6P29350 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 MIR3687-1-201ENST00000614492 61 ntBASIC15.36■□□□□ 0.05
PTPN6P29350 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.36■□□□□ 0.05
PTPN6P29350 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PTPN6P29350 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PTPN6P29350 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PTPN6P29350 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN6P29350 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN6P29350 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN6P29350 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms