Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.07■□□□□ 0.16
NELFEP18615 AC093520.2-201ENST00000561830 333 ntBASIC16.07■□□□□ 0.16
NELFEP18615 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.07■□□□□ 0.16
NELFEP18615 AL031055.1-201ENST00000606362 631 ntBASIC16.07■□□□□ 0.16
NELFEP18615 AC009093.7-201ENST00000623853 1223 ntBASIC16.07■□□□□ 0.16
NELFEP18615 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.07■□□□□ 0.16
NELFEP18615 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.07■□□□□ 0.16
NELFEP18615 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.07■□□□□ 0.16
NELFEP18615 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NELFEP18615 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 ALOX12P2-203ENST00000570921 1945 ntBASIC16.06■□□□□ 0.16
NELFEP18615 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NELFEP18615 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 AC025678.2-201ENST00000562061 970 ntBASIC16.06■□□□□ 0.16
NELFEP18615 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.06■□□□□ 0.16
NELFEP18615 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NELFEP18615 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NELFEP18615 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NELFEP18615 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.06■□□□□ 0.16
NELFEP18615 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFEP18615 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.05■□□□□ 0.16
NELFEP18615 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFEP18615 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.05■□□□□ 0.16
NELFEP18615 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.05■□□□□ 0.16
NELFEP18615 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFEP18615 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NELFEP18615 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.05■□□□□ 0.16
NELFEP18615 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.05■□□□□ 0.16
NELFEP18615 AC106028.4-201ENST00000614509 607 ntBASIC16.05■□□□□ 0.16
NELFEP18615 LINC00628-201ENST00000628516 1289 ntBASIC16.05■□□□□ 0.16
NELFEP18615 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NELFEP18615 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NELFEP18615 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.05■□□□□ 0.16
NELFEP18615 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NELFEP18615 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms