Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 FAM86MP-201ENST00000340703 885 ntBASIC17.82■□□□□ 0.44
SMPD1P17405 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.82■□□□□ 0.44
SMPD1P17405 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 PHKG1P2-201ENST00000457537 863 ntBASIC17.82■□□□□ 0.44
SMPD1P17405 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.82■□□□□ 0.44
SMPD1P17405 AC124283.3-201ENST00000570869 594 ntBASIC17.82■□□□□ 0.44
SMPD1P17405 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.82■□□□□ 0.44
SMPD1P17405 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.82■□□□□ 0.44
SMPD1P17405 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.82■□□□□ 0.44
SMPD1P17405 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.82■□□□□ 0.44
SMPD1P17405 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.82■□□□□ 0.44
SMPD1P17405 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
SMPD1P17405 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMPD1P17405 AC138932.1-201ENST00000534164 6830 ntBASIC17.82■□□□□ 0.44
SMPD1P17405 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMPD1P17405 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SMPD1P17405 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SMPD1P17405 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 ME2P1-201ENST00000426028 1970 ntBASIC17.81■□□□□ 0.44
SMPD1P17405 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMPD1P17405 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 AC134915.1-201ENST00000426461 574 ntBASIC17.81■□□□□ 0.44
SMPD1P17405 BCRP2-202ENST00000447763 634 ntBASIC17.81■□□□□ 0.44
SMPD1P17405 BCRP6-201ENST00000510112 632 ntBASIC17.81■□□□□ 0.44
SMPD1P17405 BCRP7-201ENST00000511549 544 ntBASIC17.81■□□□□ 0.44
SMPD1P17405 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.81■□□□□ 0.44
SMPD1P17405 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.81■□□□□ 0.44
SMPD1P17405 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.81■□□□□ 0.44
SMPD1P17405 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.81■□□□□ 0.44
SMPD1P17405 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMPD1P17405 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SMPD1P17405 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.81■□□□□ 0.44
SMPD1P17405 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SMPD1P17405 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMPD1P17405 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 AC026471.1-201ENST00000564629 3026 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.8■□□□□ 0.44
SMPD1P17405 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.8■□□□□ 0.44
SMPD1P17405 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.8■□□□□ 0.44
SMPD1P17405 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.8■□□□□ 0.44
SMPD1P17405 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMPD1P17405 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.8■□□□□ 0.44
SMPD1P17405 KLF2P4-201ENST00000451959 1225 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SMPD1P17405 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMPD1P17405 SLED1-202ENST00000512051 380 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 AL022328.1-201ENST00000610050 478 ntBASIC17.8■□□□□ 0.44
SMPD1P17405 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
SMPD1P17405 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms