Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CTLA4P16410 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.37□□□□□ -0.11
CTLA4P16410 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 MIR940-201ENST00000401276 94 ntBASIC14.37□□□□□ -0.11
CTLA4P16410 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.37□□□□□ -0.11
CTLA4P16410 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CTLA4P16410 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.37□□□□□ -0.11
CTLA4P16410 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.37□□□□□ -0.11
CTLA4P16410 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
CTLA4P16410 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.37□□□□□ -0.11
CTLA4P16410 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.37□□□□□ -0.11
CTLA4P16410 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.37□□□□□ -0.11
CTLA4P16410 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CTLA4P16410 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CTLA4P16410 AKAP8P1-201ENST00000434743 1349 ntBASIC14.37□□□□□ -0.11
CTLA4P16410 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CTLA4P16410 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CTLA4P16410 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 FOXO1B-201ENST00000504678 1527 ntBASIC14.36□□□□□ -0.11
CTLA4P16410 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.36□□□□□ -0.11
CTLA4P16410 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 GPX1P2-201ENST00000429271 606 ntBASIC14.36□□□□□ -0.11
CTLA4P16410 FAM58CP-201ENST00000435741 640 ntBASIC14.36□□□□□ -0.11
CTLA4P16410 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.36□□□□□ -0.11
CTLA4P16410 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.36□□□□□ -0.11
CTLA4P16410 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.36□□□□□ -0.11
CTLA4P16410 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.36□□□□□ -0.11
CTLA4P16410 AL135744.1-201ENST00000565098 629 ntBASIC14.36□□□□□ -0.11
CTLA4P16410 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CTLA4P16410 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 AC092902.6-201ENST00000641783 218 ntBASIC14.36□□□□□ -0.11
CTLA4P16410 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CTLA4P16410 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CTLA4P16410 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CTLA4P16410 AC092384.3-202ENST00000564646 2873 ntBASIC14.36□□□□□ -0.11
CTLA4P16410 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
CTLA4P16410 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 AC011477.6-201ENST00000604980 1927 ntBASIC14.35□□□□□ -0.11
CTLA4P16410 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CTLA4P16410 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CTLA4P16410 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.35□□□□□ -0.11
CTLA4P16410 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CTLA4P16410 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms