Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 AL138918.1-201ENST00000568306 659 ntBASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 MIR4453-201ENST00000584019 89 ntBASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL3P0C7X3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC097493.3-201ENST00000509725 367 ntBASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC003101.2-201ENST00000612557 442 ntBASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 AC018529.1-201ENST00000613063 361 ntBASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL3P0C7X3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.68■□□□□ 0.1
CCNYL3P0C7X3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms