Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
HLA-DOAP06340 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.97■□□□□ 0.63
HLA-DOAP06340 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLA-DOAP06340 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 MYCLP2-201ENST00000449268 967 ntBASIC18.96■□□□□ 0.63
HLA-DOAP06340 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 AC123567.1-201ENST00000548294 1261 ntBASIC18.96■□□□□ 0.63
HLA-DOAP06340 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 RRP7BP-205ENST00000566851 833 ntBASIC18.96■□□□□ 0.63
HLA-DOAP06340 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 AC093726.1-201ENST00000608064 963 ntBASIC18.96■□□□□ 0.63
HLA-DOAP06340 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HLA-DOAP06340 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HLA-DOAP06340 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.95■□□□□ 0.62
HLA-DOAP06340 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 BNIP3P1-202ENST00000550043 1585 ntBASIC18.95■□□□□ 0.62
HLA-DOAP06340 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 HAUS4P1-201ENST00000406739 1145 ntBASIC18.95■□□□□ 0.62
HLA-DOAP06340 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HLA-DOAP06340 AP001282.1-201ENST00000531301 1499 ntBASIC18.95■□□□□ 0.62
HLA-DOAP06340 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
HLA-DOAP06340 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 AC011676.5-201ENST00000624864 2660 ntBASIC18.94■□□□□ 0.62
HLA-DOAP06340 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HLA-DOAP06340 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HLA-DOAP06340 INE1-201ENST00000456273 945 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms