Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
APOC1P02654 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOC1P02654 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
APOC1P02654 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 AC024909.3-201ENST00000611513 2257 ntBASIC14.39□□□□□ -0.11
APOC1P02654 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 MIR648-201ENST00000385046 94 ntBASIC14.39□□□□□ -0.11
APOC1P02654 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.39□□□□□ -0.11
APOC1P02654 AC079776.4-201ENST00000511039 504 ntBASIC14.39□□□□□ -0.11
APOC1P02654 AC096734.2-201ENST00000562054 433 ntBASIC14.39□□□□□ -0.11
APOC1P02654 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.39□□□□□ -0.11
APOC1P02654 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
APOC1P02654 AC104692.2-201ENST00000603054 253 ntBASIC14.39□□□□□ -0.11
APOC1P02654 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 AC116407.3-201ENST00000623905 1129 ntBASIC14.39□□□□□ -0.11
APOC1P02654 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 OR2I1P-209ENST00000641730 5365 ntBASIC14.39□□□□□ -0.11
APOC1P02654 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.39□□□□□ -0.11
APOC1P02654 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.39□□□□□ -0.11
APOC1P02654 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
APOC1P02654 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
APOC1P02654 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.38□□□□□ -0.11
APOC1P02654 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 MIR7706-201ENST00000613747 67 ntBASIC14.38□□□□□ -0.11
APOC1P02654 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms