Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC093433.1-201ENST00000458048 571 ntBASIC19.42■□□□□ 0.7
COL4A1P02462 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL4A1P02462 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A1P02462 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A1P02462 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A1P02462 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.41■□□□□ 0.7
COL4A1P02462 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A1P02462 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.41■□□□□ 0.7
COL4A1P02462 AC026410.3-201ENST00000514280 936 ntBASIC19.41■□□□□ 0.7
COL4A1P02462 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A1P02462 AL022328.1-201ENST00000610050 478 ntBASIC19.41■□□□□ 0.7
COL4A1P02462 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.41■□□□□ 0.7
COL4A1P02462 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.41■□□□□ 0.7
COL4A1P02462 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL4A1P02462 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A1P02462 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL4A1P02462 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A1P02462 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A1P02462 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A1P02462 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL4A1P02462 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
COL4A1P02462 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 KRT43P-201ENST00000434019 910 ntBASIC19.4■□□□□ 0.7
COL4A1P02462 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.4■□□□□ 0.7
COL4A1P02462 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 AP000812.2-201ENST00000538934 718 ntBASIC19.4■□□□□ 0.7
COL4A1P02462 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.4■□□□□ 0.7
COL4A1P02462 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A1P02462 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
COL4A1P02462 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A1P02462 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A1P02462 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A1P02462 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A1P02462 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A1P02462 PTP4A1P2-201ENST00000546033 454 ntBASIC19.4■□□□□ 0.7
COL4A1P02462 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.4■□□□□ 0.7
COL4A1P02462 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A1P02462 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.39■□□□□ 0.7
COL4A1P02462 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.39■□□□□ 0.7
COL4A1P02462 AD000864.1-201ENST00000624076 2295 ntBASIC19.39■□□□□ 0.7
COL4A1P02462 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL4A1P02462 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.39■□□□□ 0.7
COL4A1P02462 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COL4A1P02462 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 NKILA-202ENST00000614771 2598 ntBASIC19.39■□□□□ 0.69
COL4A1P02462 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A1P02462 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.69
COL4A1P02462 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A1P02462 BAATP1-201ENST00000412284 1225 ntBASIC19.39■□□□□ 0.69
COL4A1P02462 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A1P02462 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.39■□□□□ 0.69
COL4A1P02462 AC022137.2-201ENST00000503482 481 ntBASIC19.39■□□□□ 0.69
COL4A1P02462 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.39■□□□□ 0.69
COL4A1P02462 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A1P02462 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A1P02462 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A1P02462 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.39■□□□□ 0.69
COL4A1P02462 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms