Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GGPS1O95749 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
GGPS1O95749 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GGPS1O95749 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GGPS1O95749 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GGPS1O95749 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.1■□□□□ 0.49
GGPS1O95749 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GGPS1O95749 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GGPS1O95749 ALOX12P2-203ENST00000570921 1945 ntBASIC18.1■□□□□ 0.49
GGPS1O95749 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.09■□□□□ 0.49
GGPS1O95749 AL391825.1-201ENST00000457671 1364 ntBASIC18.09■□□□□ 0.49
GGPS1O95749 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GGPS1O95749 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.09■□□□□ 0.49
GGPS1O95749 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
GGPS1O95749 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
GGPS1O95749 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 AC087499.6-201ENST00000411576 835 ntBASIC18.09■□□□□ 0.49
GGPS1O95749 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 AC244107.1-201ENST00000442033 332 ntBASIC18.09■□□□□ 0.49
GGPS1O95749 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.09■□□□□ 0.49
GGPS1O95749 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.09■□□□□ 0.49
GGPS1O95749 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.09■□□□□ 0.49
GGPS1O95749 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GGPS1O95749 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.09■□□□□ 0.49
GGPS1O95749 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.09■□□□□ 0.49
GGPS1O95749 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GGPS1O95749 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GGPS1O95749 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GGPS1O95749 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.08■□□□□ 0.49
GGPS1O95749 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
GGPS1O95749 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GGPS1O95749 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GGPS1O95749 REXO1L8P-201ENST00000604378 1897 ntBASIC18.08■□□□□ 0.49
GGPS1O95749 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GGPS1O95749 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GGPS1O95749 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
GGPS1O95749 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 DGCR5-201ENST00000399539 862 ntBASIC18.08■□□□□ 0.48
GGPS1O95749 FO393414.2-201ENST00000405153 598 ntBASIC18.08■□□□□ 0.48
GGPS1O95749 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.08■□□□□ 0.48
GGPS1O95749 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.08■□□□□ 0.48
GGPS1O95749 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.08■□□□□ 0.48
GGPS1O95749 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
GGPS1O95749 TPRX2P-201ENST00000535362 881 ntBASIC18.08■□□□□ 0.48
GGPS1O95749 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.08■□□□□ 0.48
GGPS1O95749 AC025048.3-201ENST00000590609 569 ntBASIC18.08■□□□□ 0.48
GGPS1O95749 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.08■□□□□ 0.48
GGPS1O95749 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.08■□□□□ 0.48
GGPS1O95749 AC005702.4-201ENST00000618393 416 ntBASIC18.08■□□□□ 0.48
GGPS1O95749 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
GGPS1O95749 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.08■□□□□ 0.48
GGPS1O95749 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.08■□□□□ 0.48
GGPS1O95749 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.08■□□□□ 0.48
GGPS1O95749 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.08■□□□□ 0.48
GGPS1O95749 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.08■□□□□ 0.48
GGPS1O95749 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
GGPS1O95749 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 AC138969.3-201ENST00000546612 1459 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 AC138932.2-201ENST00000548268 1459 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 AC126755.4-201ENST00000549796 1459 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 AL691432.1-201ENST00000596308 1422 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 CU639417.3-201ENST00000624240 1404 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.07■□□□□ 0.48
GGPS1O95749 SLC7A15P-201ENST00000424028 1363 ntBASIC18.07■□□□□ 0.48
GGPS1O95749 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GGPS1O95749 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms