Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.43□□□□□ -0.1
CNOT4O95628 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.43□□□□□ -0.1
CNOT4O95628 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 INGX-202ENST00000489074 768 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.43□□□□□ -0.1
CNOT4O95628 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
CNOT4O95628 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 AC018529.1-201ENST00000613063 361 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.43□□□□□ -0.1
CNOT4O95628 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 AP3S2-216ENST00000617003 1561 ntBASIC14.43□□□□□ -0.1
CNOT4O95628 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CNOT4O95628 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CNOT4O95628 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
CNOT4O95628 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.42□□□□□ -0.1
CNOT4O95628 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.42□□□□□ -0.1
CNOT4O95628 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.42□□□□□ -0.1
CNOT4O95628 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.42□□□□□ -0.1
CNOT4O95628 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.42□□□□□ -0.1
CNOT4O95628 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.42□□□□□ -0.1
CNOT4O95628 DUX4L27-201ENST00000554796 1261 ntBASIC14.42□□□□□ -0.1
CNOT4O95628 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.42□□□□□ -0.1
CNOT4O95628 Z92544.3-201ENST00000624747 417 ntBASIC14.42□□□□□ -0.1
CNOT4O95628 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CNOT4O95628 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CNOT4O95628 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.42□□□□□ -0.1
CNOT4O95628 AL035456.1-201ENST00000456064 1369 ntBASIC14.42□□□□□ -0.1
CNOT4O95628 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.42□□□□□ -0.1
CNOT4O95628 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.42□□□□□ -0.1
CNOT4O95628 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CNOT4O95628 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 RNF216P1-203ENST00000404404 2427 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CNOT4O95628 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
CNOT4O95628 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 AL353705.2-201ENST00000428243 662 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.41□□□□□ -0.1
CNOT4O95628 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.41□□□□□ -0.1
CNOT4O95628 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.41□□□□□ -0.1
CNOT4O95628 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.41□□□□□ -0.1
CNOT4O95628 AC051619.7-201ENST00000568314 623 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.41□□□□□ -0.1
CNOT4O95628 AC007967.4-201ENST00000614700 386 ntBASIC14.41□□□□□ -0.1
CNOT4O95628 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.41□□□□□ -0.1
CNOT4O95628 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.41□□□□□ -0.1
CNOT4O95628 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
CNOT4O95628 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CNOT4O95628 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms