Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18■□□□□ 0.47
CLSTN1O94985 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18■□□□□ 0.47
CLSTN1O94985 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLSTN1O94985 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18■□□□□ 0.47
CLSTN1O94985 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 BX842568.4-201ENST00000421222 227 ntBASIC18■□□□□ 0.47
CLSTN1O94985 RHOQP3-201ENST00000437982 621 ntBASIC18■□□□□ 0.47
CLSTN1O94985 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18■□□□□ 0.47
CLSTN1O94985 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18■□□□□ 0.47
CLSTN1O94985 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18■□□□□ 0.47
CLSTN1O94985 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 CD7-202ENST00000578509 925 ntTSL 3 BASIC18■□□□□ 0.47
CLSTN1O94985 SIGLEC29P-201ENST00000599873 1114 ntBASIC18■□□□□ 0.47
CLSTN1O94985 AL671883.3-201ENST00000603274 991 ntBASIC18■□□□□ 0.47
CLSTN1O94985 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLSTN1O94985 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18■□□□□ 0.47
CLSTN1O94985 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLSTN1O94985 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLSTN1O94985 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CLSTN1O94985 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 LINC02199-201ENST00000506655 2702 ntBASIC17.99■□□□□ 0.47
CLSTN1O94985 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.99■□□□□ 0.47
CLSTN1O94985 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 AC013467.2-201ENST00000605472 835 ntBASIC17.99■□□□□ 0.47
CLSTN1O94985 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLSTN1O94985 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.99■□□□□ 0.47
CLSTN1O94985 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 AC105917.1-201ENST00000506637 2539 ntBASIC17.99■□□□□ 0.47
CLSTN1O94985 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLSTN1O94985 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLSTN1O94985 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLSTN1O94985 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.98■□□□□ 0.47
CLSTN1O94985 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.98■□□□□ 0.47
CLSTN1O94985 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 FAM58CP-201ENST00000435741 640 ntBASIC17.98■□□□□ 0.47
CLSTN1O94985 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 AC010327.4-202ENST00000591484 748 ntBASIC17.98■□□□□ 0.47
CLSTN1O94985 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLSTN1O94985 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms