Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.79■□□□□ 0.6
CTNND1O60716 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CTNND1O60716 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CTNND1O60716 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CTNND1O60716 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTNND1O60716 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CTNND1O60716 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CTNND1O60716 BOLA2P3-201ENST00000404566 256 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 AL442647.2-201ENST00000429864 857 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.78■□□□□ 0.6
CTNND1O60716 AC022494.1-201ENST00000466044 728 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.78■□□□□ 0.6
CTNND1O60716 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.78■□□□□ 0.6
CTNND1O60716 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTNND1O60716 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.78■□□□□ 0.6
CTNND1O60716 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.78■□□□□ 0.6
CTNND1O60716 AC036164.1-201ENST00000570544 333 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CTNND1O60716 BTNL10-201ENST00000595971 695 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CTNND1O60716 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.78■□□□□ 0.6
CTNND1O60716 MIR6775-201ENST00000617557 69 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 RPSAP52-203ENST00000622976 1023 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 AL158212.4-201ENST00000624062 1286 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 COX11-210ENST00000639671 696 ntBASIC18.78■□□□□ 0.6
CTNND1O60716 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CTNND1O60716 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.78■□□□□ 0.6
CTNND1O60716 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CTNND1O60716 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.77■□□□□ 0.6
CTNND1O60716 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.77■□□□□ 0.6
CTNND1O60716 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CTNND1O60716 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CTNND1O60716 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.77■□□□□ 0.6
CTNND1O60716 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CTNND1O60716 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.77■□□□□ 0.6
CTNND1O60716 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.77■□□□□ 0.6
CTNND1O60716 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CTNND1O60716 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CTNND1O60716 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CTNND1O60716 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CTNND1O60716 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
CTNND1O60716 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.77■□□□□ 0.59
CTNND1O60716 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CTNND1O60716 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CTNND1O60716 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.76■□□□□ 0.59
CTNND1O60716 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CTNND1O60716 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.76■□□□□ 0.59
CTNND1O60716 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms