Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ATP2A1O14983 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ATP2A1O14983 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP2A1O14983 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
ATP2A1O14983 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 ARSEP1-201ENST00000420443 635 ntBASIC18.43■□□□□ 0.54
ATP2A1O14983 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.43■□□□□ 0.54
ATP2A1O14983 TIMM17BP1-201ENST00000545713 516 ntBASIC18.43■□□□□ 0.54
ATP2A1O14983 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP2A1O14983 TMEM261P1-201ENST00000604899 340 ntBASIC18.43■□□□□ 0.54
ATP2A1O14983 AL391069.4-201ENST00000609583 481 ntBASIC18.43■□□□□ 0.54
ATP2A1O14983 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.43■□□□□ 0.54
ATP2A1O14983 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP2A1O14983 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.43■□□□□ 0.54
ATP2A1O14983 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.43■□□□□ 0.54
ATP2A1O14983 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ATP2A1O14983 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.43■□□□□ 0.54
ATP2A1O14983 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ATP2A1O14983 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ATP2A1O14983 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 AC098850.1-201ENST00000419919 790 ntBASIC18.42■□□□□ 0.54
ATP2A1O14983 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP2A1O14983 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP2A1O14983 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ATP2A1O14983 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ATP2A1O14983 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.42■□□□□ 0.54
ATP2A1O14983 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ATP2A1O14983 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 AC132938.2-201ENST00000579188 680 ntBASIC18.42■□□□□ 0.54
ATP2A1O14983 CTBP2P3-201ENST00000585629 1255 ntBASIC18.42■□□□□ 0.54
ATP2A1O14983 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.42■□□□□ 0.54
ATP2A1O14983 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.42■□□□□ 0.54
ATP2A1O14983 AL162274.1-201ENST00000617191 1098 ntBASIC18.42■□□□□ 0.54
ATP2A1O14983 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 AL591163.1-201ENST00000641757 987 ntBASIC18.42■□□□□ 0.54
ATP2A1O14983 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ATP2A1O14983 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ATP2A1O14983 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ATP2A1O14983 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ATP2A1O14983 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ATP2A1O14983 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms