Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 KRT18P2-201ENST00000447938 1258 ntBASIC13.19□□□□□ -0.3
LINC00473A8K010 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00473A8K010 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LINC00473A8K010 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00473A8K010 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00473A8K010 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00473A8K010 AC145285.3-201ENST00000564603 959 ntBASIC13.19□□□□□ -0.3
LINC00473A8K010 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00473A8K010 AC002347.1-201ENST00000569543 541 ntBASIC13.19□□□□□ -0.3
LINC00473A8K010 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00473A8K010 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00473A8K010 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00473A8K010 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00473A8K010 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 AC136621.1-201ENST00000624017 2304 ntBASIC13.19□□□□□ -0.3
LINC00473A8K010 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00473A8K010 SSR4P1-203ENST00000599569 2260 ntBASIC13.19□□□□□ -0.3
LINC00473A8K010 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00473A8K010 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00473A8K010 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00473A8K010 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00473A8K010 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LINC00473A8K010 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00473A8K010 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
LINC00473A8K010 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 AC007967.2-201ENST00000432613 625 ntBASIC13.18□□□□□ -0.3
LINC00473A8K010 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.18□□□□□ -0.3
LINC00473A8K010 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 MIR4321-201ENST00000592276 80 ntBASIC13.18□□□□□ -0.3
LINC00473A8K010 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00473A8K010 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.18□□□□□ -0.3
LINC00473A8K010 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 WASH6P-202ENST00000359512 1437 ntBASIC13.18□□□□□ -0.3
LINC00473A8K010 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LINC00473A8K010 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
LINC00473A8K010 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.18□□□□□ -0.3
LINC00473A8K010 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LINC00473A8K010 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms