Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 AC005829.1-201ENST00000570002 483 ntBASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 MIR4321-201ENST00000592276 80 ntBASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCDC162PA2VCL2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 CEND1P1-201ENST00000451006 455 ntBASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CCDC162PA2VCL2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC008677.1-201ENST00000519230 1561 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 PAUPAR-201ENST00000630360 2965 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 MIR346-201ENST00000362234 95 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 GPX1P2-201ENST00000429271 606 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC112482.1-201ENST00000492080 688 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AP000842.3-202ENST00000569238 1080 ntBASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.21■□□□□ 0.19
CCDC162PA2VCL2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms