Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AC074386.1-202ENST00000463561 864 ntBASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-DRB4X5D2U9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AC067930.6-201ENST00000623257 4947 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AC002056.1-201ENST00000395613 760 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AC040169.1-201ENST00000565382 521 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AL513190.1-201ENST00000621254 727 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AL161645.1-201ENST00000622716 1255 ntBASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms