Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 REXO1L1P-202ENST00000608646 1974 ntBASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC073195.1-201ENST00000607241 877 ntBASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC024243.1-201ENST00000609234 778 ntBASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AC092865.7-201ENST00000641832 219 ntBASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 AL031731.1-201ENST00000642131 2094 ntBASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAPPC1Q9Y5R8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 PCGF3-213ENST00000620529 1899 ntBASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 UBE2SP1-201ENST00000450587 669 ntBASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 CICP17-201ENST00000418553 2377 ntBASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TRAPPC1Q9Y5R8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms