Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGB1Q9Y5G3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AC016734.2-201ENST00000624325 1377 ntBASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AC009078.2-202ENST00000463353 338 ntBASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AL353135.1-201ENST00000606729 504 ntBASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AC114341.1-201ENST00000618070 349 ntBASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 AC079776.2-201ENST00000641154 1609 ntBASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDHGB1Q9Y5G3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 PRYP5-201ENST00000451909 266 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 MIR3180-1-201ENST00000580374 94 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 MIR3180-3-201ENST00000584616 94 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 BNIP3P18-201ENST00000593976 575 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AC087481.3-201ENST00000602886 1894 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 AL390755.1-201ENST00000623716 2027 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 KRT18P1-202ENST00000452408 1331 ntBASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDHGB1Q9Y5G3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDHGB1Q9Y5G3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms