Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RCL1Q9Y2P8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 AC096582.2-201ENST00000510860 516 ntBASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 KRT8P26-201ENST00000534154 1276 ntBASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 CYP2A7P1-201ENST00000595391 815 ntBASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RCL1Q9Y2P8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 TCAF2P1-201ENST00000291129 2421 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AC008677.1-201ENST00000519230 1561 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 BNIP3P18-201ENST00000593976 575 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AC010331.1-201ENST00000611423 582 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AC020765.3-201ENST00000613051 740 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AC006011.2-201ENST00000621313 1158 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 AL359258.3-201ENST00000622910 2331 ntBASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RCL1Q9Y2P8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 AC079776.2-201ENST00000641154 1609 ntBASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RCL1Q9Y2P8 SLC22A20-204ENST00000530038 1673 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms