Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDZRN3Q9UPQ7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SLC22A20-204ENST00000530038 1673 ntBASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AC022188.1-201ENST00000620960 1664 ntBASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AL353779.1-201ENST00000434793 351 ntBASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 AC003101.2-201ENST00000612557 442 ntBASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDZRN3Q9UPQ7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 AL138918.1-201ENST00000568306 659 ntBASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 KRT8P39-201ENST00000396270 1433 ntBASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDZRN3Q9UPQ7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 AC087499.5-201ENST00000452760 1342 ntBASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 AL365203.3-201ENST00000609742 2057 ntBASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 GPR53P-205ENST00000457298 1084 ntBASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDZRN3Q9UPQ7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms