Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AC005052.1-201ENST00000625181 2492 ntBASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CLCF1Q9UBD9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 PIN1P1-201ENST00000412108 996 ntBASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 CRB3P1-201ENST00000449338 276 ntBASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC135586.1-201ENST00000539323 574 ntBASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC044860.1-202ENST00000559481 777 ntBASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 MIR6069-201ENST00000620069 79 ntBASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.35□□□□□ -0.11
CLCF1Q9UBD9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms