Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 AC097637.2-201ENST00000624096 1997 ntBASIC13.89□□□□□ -0.19
COMMD9Q9P000 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 AL021920.2-201ENST00000624828 1351 ntBASIC13.89□□□□□ -0.19
COMMD9Q9P000 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 NTF6B-201ENST00000591913 560 ntBASIC13.89□□□□□ -0.19
COMMD9Q9P000 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.89□□□□□ -0.19
COMMD9Q9P000 AL121956.5-201ENST00000625261 221 ntBASIC13.89□□□□□ -0.19
COMMD9Q9P000 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD9Q9P000 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD9Q9P000 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.88□□□□□ -0.19
COMMD9Q9P000 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.88□□□□□ -0.19
COMMD9Q9P000 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 SNX18-202ENST00000343017 3140 ntBASIC13.88□□□□□ -0.19
COMMD9Q9P000 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 ACTG1P4-201ENST00000425123 1122 ntBASIC13.88□□□□□ -0.19
COMMD9Q9P000 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 PTENP1-202ENST00000532280 3996 ntBASIC13.88□□□□□ -0.19
COMMD9Q9P000 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.88□□□□□ -0.19
COMMD9Q9P000 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
COMMD9Q9P000 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms