Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HPS4Q9NQG7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 DFFBP1-201ENST00000433250 979 ntBASIC16.75■□□□□ 0.27
HPS4Q9NQG7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 KRT8P12-202ENST00000472924 1397 ntBASIC16.75■□□□□ 0.27
HPS4Q9NQG7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.75■□□□□ 0.27
HPS4Q9NQG7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AC138969.3-201ENST00000546612 1459 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AC138932.2-201ENST00000548268 1459 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AC126755.4-201ENST00000549796 1459 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 SPDYE19P-201ENST00000338590 713 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 DGCR5-201ENST00000399539 862 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 SPDYE17-201ENST00000412399 783 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 KRT17P7-201ENST00000451704 1104 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 AL008721.1-201ENST00000609964 604 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.74■□□□□ 0.27
HPS4Q9NQG7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.74■□□□□ 0.27
HPS4Q9NQG7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HPS4Q9NQG7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms