Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEBOXQ9HB31 AC092171.3-201ENST00000610122 2651 ntBASIC13.83□□□□□ -0.2
SEBOXQ9HB31 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SEBOXQ9HB31 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SEBOXQ9HB31 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.83□□□□□ -0.2
SEBOXQ9HB31 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SEBOXQ9HB31 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 AC025580.3-201ENST00000617932 1424 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 ALOX12P2-203ENST00000570921 1945 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 AL592424.1-201ENST00000563624 1536 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 AC074386.1-202ENST00000463561 864 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 KRT18P34-201ENST00000488218 1270 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 PDPK2P-202ENST00000562415 1191 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 BCAR1-209ENST00000546196 1340 ntBASIC13.82□□□□□ -0.2
SEBOXQ9HB31 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SEBOXQ9HB31 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 U82695.1-201ENST00000635752 1889 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AC002056.1-201ENST00000395613 760 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AC026396.1-201ENST00000419388 421 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 KRT18P2-201ENST00000447938 1258 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 RNA5SP416-201ENST00000516838 111 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AL078644.1-201ENST00000609881 752 ntBASIC13.81□□□□□ -0.2
SEBOXQ9HB31 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SEBOXQ9HB31 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms