Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AC004987.2-201ENST00000395959 1148 ntBASIC18.8■□□□□ 0.6
SH2D4AQ9H788 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 SLC7A15P-201ENST00000424028 1363 ntBASIC18.8■□□□□ 0.6
SH2D4AQ9H788 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.8■□□□□ 0.6
SH2D4AQ9H788 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 SPDYE18-201ENST00000510091 1050 ntBASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 TPRX2P-201ENST00000535362 881 ntBASIC18.79■□□□□ 0.6
SH2D4AQ9H788 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SH2D4AQ9H788 PCDHA14-201ENST00000506751 2298 ntBASIC18.79■□□□□ 0.6
SH2D4AQ9H788 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 PCDHB19P-201ENST00000570871 2371 ntBASIC18.78■□□□□ 0.6
SH2D4AQ9H788 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SH2D4AQ9H788 AC138969.3-201ENST00000546612 1459 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms