Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC090971.3-201ENST00000557871 1041 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC122108.1-201ENST00000558419 424 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC015917.1-201ENST00000579654 510 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 MIR3621-201ENST00000580529 85 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 POLR3GP2-201ENST00000588366 668 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL669831.4-202ENST00000590817 238 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC098614.4-201ENST00000607601 462 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AL078596.1-201ENST00000624856 447 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AP006587.3-201ENST00000525742 1516 ntBASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-3Q9BYR6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 U3.4-201ENST00000363352 213 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 RN7SKP28-201ENST00000364770 305 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 WFDC12-201ENST00000372785 775 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 Y_RNA.529-201ENST00000384586 119 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 KRTAP4-7-201ENST00000391417 992 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 HMGB3P19-201ENST00000403971 560 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC007390.1-201ENST00000415722 356 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 GPM6BP2-201ENST00000432046 144 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 Z85994.2-201ENST00000434327 452 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 KRT16P3-201ENST00000439127 1283 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 GPM6BP1-201ENST00000446387 144 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 C1DP3-201ENST00000455013 423 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 CREM-220ENST00000463314 964 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 RPS17P11-201ENST00000474297 293 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC069439.1-201ENST00000494739 167 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 PDCL2P2-201ENST00000533651 189 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AL356740.2-201ENST00000601559 647 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AL020997.3-201ENST00000602843 359 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 CLPTM1LP1-201ENST00000604519 484 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AL512631.2-201ENST00000604634 923 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 Metazoa_SRP.187-201ENST00000616534 281 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 AC016542.3-201ENST00000623520 619 ntBASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 LINC00694-202ENST00000634610 769 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP3-3Q9BYR6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms