Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AZGP1P1-201ENST00000411909 902 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 KRT18P64-201ENST00000434946 1219 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 HIST3H2BA-201ENST00000436555 524 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NME4-207ENST00000450036 985 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PUDP-206ENST00000540122 825 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC023310.3-201ENST00000557027 670 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC005225.4-201ENST00000557330 545 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC100756.1-201ENST00000562736 682 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL596325.1-201ENST00000563991 1082 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC138749.3-201ENST00000567691 622 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC132938.2-201ENST00000579188 680 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SPDYE22P-201ENST00000582158 798 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 LINC01115-203ENST00000606068 577 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC116165.1-201ENST00000611806 668 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC004461.2-201ENST00000629517 803 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL591163.1-201ENST00000641757 987 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AL139011.1-202ENST00000642063 584 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PKD1P1-201ENST00000458669 6805 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC134407.2-201ENST00000625089 1978 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC9A7P1-201ENST00000554295 3311 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 PRAL-201ENST00000624952 3286 ntBASIC5.49□□□□□ -1.53
KRTAP4-3Q9BYR4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms