Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPAP1Q9BWH6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 AC004233.3-201ENST00000607794 1269 ntBASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
RPAP1Q9BWH6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 AL133215.2-201ENST00000609242 977 ntBASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPAP1Q9BWH6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 AL589702.1-201ENST00000641229 1509 ntBASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.58■□□□□ 0.72
RPAP1Q9BWH6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 MEIS3P1-201ENST00000495167 958 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AC009407.1-201ENST00000568958 598 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 AC105917.1-201ENST00000506637 2539 ntBASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.57■□□□□ 0.72
RPAP1Q9BWH6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms