Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 PRSS29P-201ENST00000440800 595 ntBASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 HCG4B-203ENST00000450128 991 ntBASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 AC020765.3-201ENST00000613051 740 ntBASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 BX640515.1-201ENST00000617215 977 ntBASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 AC023511.2-201ENST00000618803 211 ntBASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM56Q9BRZ2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 AP002414.2-201ENST00000591780 3365 ntBASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM56Q9BRZ2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM56Q9BRZ2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM56Q9BRZ2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms