Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.44□□□□□ -0.26
S1PR3Q99500 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
S1PR3Q99500 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
S1PR3Q99500 AC097376.2-205ENST00000610159 5334 ntBASIC13.44□□□□□ -0.26
S1PR3Q99500 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
S1PR3Q99500 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
S1PR3Q99500 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
S1PR3Q99500 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.44□□□□□ -0.26
S1PR3Q99500 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
S1PR3Q99500 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
S1PR3Q99500 AL603832.2-201ENST00000566195 2125 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
S1PR3Q99500 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.43□□□□□ -0.26
S1PR3Q99500 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
S1PR3Q99500 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
S1PR3Q99500 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.43□□□□□ -0.26
S1PR3Q99500 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.43□□□□□ -0.26
S1PR3Q99500 RHOQP3-201ENST00000437982 621 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 KRT18P3-201ENST00000451602 1288 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.43□□□□□ -0.26
S1PR3Q99500 KRT18P34-201ENST00000488218 1270 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.43□□□□□ -0.26
S1PR3Q99500 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
S1PR3Q99500 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.43□□□□□ -0.26
S1PR3Q99500 AC140113.2-201ENST00000604370 208 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 FAM197Y3-203ENST00000618346 717 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 AC010507.1-201ENST00000633895 436 ntBASIC13.43□□□□□ -0.26
S1PR3Q99500 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
S1PR3Q99500 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.43□□□□□ -0.26
S1PR3Q99500 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
S1PR3Q99500 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.43□□□□□ -0.26
S1PR3Q99500 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.43□□□□□ -0.26
S1PR3Q99500 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
S1PR3Q99500 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.42□□□□□ -0.26
S1PR3Q99500 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.42□□□□□ -0.26
S1PR3Q99500 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
S1PR3Q99500 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
S1PR3Q99500 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 AL139384.1-201ENST00000612143 3047 ntBASIC13.42□□□□□ -0.26
S1PR3Q99500 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
S1PR3Q99500 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.42□□□□□ -0.26
S1PR3Q99500 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 KRT18P58-201ENST00000527480 1120 ntBASIC13.42□□□□□ -0.26
S1PR3Q99500 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 AC109635.5-201ENST00000533593 962 ntBASIC13.42□□□□□ -0.26
S1PR3Q99500 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.42□□□□□ -0.26
S1PR3Q99500 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.42□□□□□ -0.26
S1PR3Q99500 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.42□□□□□ -0.26
S1PR3Q99500 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.42□□□□□ -0.26
S1PR3Q99500 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.42□□□□□ -0.26
S1PR3Q99500 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.42□□□□□ -0.26
S1PR3Q99500 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
S1PR3Q99500 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.42□□□□□ -0.26
S1PR3Q99500 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.42□□□□□ -0.26
S1PR3Q99500 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms