Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 BCRP2-202ENST00000447763 634 ntBASIC16.4■□□□□ 0.22
PHOX2BQ99453 HMGB3P14-201ENST00000494195 599 ntBASIC16.4■□□□□ 0.22
PHOX2BQ99453 BCRP6-201ENST00000510112 632 ntBASIC16.4■□□□□ 0.22
PHOX2BQ99453 BCRP7-201ENST00000511549 544 ntBASIC16.4■□□□□ 0.22
PHOX2BQ99453 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 RN7SL560P-201ENST00000577943 264 ntBASIC16.4■□□□□ 0.22
PHOX2BQ99453 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 AC025048.3-201ENST00000590609 569 ntBASIC16.4■□□□□ 0.22
PHOX2BQ99453 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PHOX2BQ99453 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
PHOX2BQ99453 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PHOX2BQ99453 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
PHOX2BQ99453 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AL355334.1-201ENST00000417713 215 ntBASIC16.39■□□□□ 0.21
PHOX2BQ99453 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PHOX2BQ99453 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.39■□□□□ 0.21
PHOX2BQ99453 AL118508.1-201ENST00000613502 2345 ntBASIC16.39■□□□□ 0.21
PHOX2BQ99453 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 ARL4AP4-201ENST00000434170 518 ntBASIC16.38■□□□□ 0.21
PHOX2BQ99453 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AL022328.3-201ENST00000607943 679 ntBASIC16.38■□□□□ 0.21
PHOX2BQ99453 AL022328.1-201ENST00000610050 478 ntBASIC16.38■□□□□ 0.21
PHOX2BQ99453 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AC108860.2-201ENST00000562760 2183 ntBASIC16.38■□□□□ 0.21
PHOX2BQ99453 KRT18P55-202ENST00000578578 1546 ntBASIC16.38■□□□□ 0.21
PHOX2BQ99453 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
PHOX2BQ99453 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PHOX2BQ99453 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PHOX2BQ99453 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHOX2BQ99453 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHOX2BQ99453 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PHOX2BQ99453 CICP6-201ENST00000457191 2729 ntBASIC16.37■□□□□ 0.21
PHOX2BQ99453 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PHOX2BQ99453 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms