Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 SOCS2P1-201ENST00000417727 557 ntBASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 FTH1P14-201ENST00000482930 551 ntBASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AC015936.2-201ENST00000593177 259 ntBASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.75■□□□□ 0.59
CDK5RAP2Q96SN8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 AC234783.1-201ENST00000441761 496 ntBASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 AC068587.3-201ENST00000526613 355 ntBASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDK5RAP2Q96SN8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 KRT17P8-201ENST00000540749 863 ntBASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP2Q96SN8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 KRT8P22-201ENST00000562317 1415 ntBASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 ARSEP1-201ENST00000420443 635 ntBASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 AC244107.1-201ENST00000442033 332 ntBASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 VDAC1P7-201ENST00000462417 847 ntBASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 CYP2T1P-202ENST00000641596 2535 ntBASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP2Q96SN8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms