Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC132938.2-201ENST00000579188 680 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 AL365330.1-201ENST00000607459 531 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 IGHV3-72-202ENST00000621503 303 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 AL591163.1-201ENST00000641757 987 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 SLC7A15P-201ENST00000424028 1363 ntBASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC85AQ96PX6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 CU639417.3-201ENST00000624240 1404 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AL592424.1-201ENST00000563624 1536 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AC098850.1-201ENST00000419919 790 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AC093004.1-201ENST00000508850 424 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AC025048.3-201ENST00000590609 569 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AL008721.1-201ENST00000609964 604 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AC005702.4-201ENST00000618393 416 ntBASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC85AQ96PX6 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC85AQ96PX6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.02■□□□□ 0.79
CCDC85AQ96PX6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC85AQ96PX6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC85AQ96PX6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.02■□□□□ 0.79
CCDC85AQ96PX6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 POU5F1P6-201ENST00000466990 990 ntBASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 AC092364.2-201ENST00000596710 2692 ntBASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC85AQ96PX6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 PCDH8P1-201ENST00000428983 2773 ntBASIC20■□□□□ 0.79
CCDC85AQ96PX6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC85AQ96PX6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC85AQ96PX6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms