Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AC211486.1-202ENST00000416371 468 ntBASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AC211476.1-201ENST00000503899 468 ntBASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 RARRES2P9-201ENST00000565168 469 ntBASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 AC011477.6-201ENST00000604980 1927 ntBASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CSPG4P5Q96PW8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 KRT18P32-201ENST00000424695 1287 ntBASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 AC004835.2-201ENST00000603762 682 ntBASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CSPG4P5Q96PW8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 GPS2P2-201ENST00000430745 888 ntBASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CSPG4P5Q96PW8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms