Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ALPK3Q96L96 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ALPK3Q96L96 BNIP3P1-202ENST00000550043 1585 ntBASIC17.28■□□□□ 0.36
ALPK3Q96L96 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ALPK3Q96L96 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.27■□□□□ 0.36
ALPK3Q96L96 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALPK3Q96L96 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ALPK3Q96L96 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALPK3Q96L96 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALPK3Q96L96 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 CTBP2P4-201ENST00000513884 920 ntBASIC17.27■□□□□ 0.35
ALPK3Q96L96 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALPK3Q96L96 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ALPK3Q96L96 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.27■□□□□ 0.35
ALPK3Q96L96 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 AC136604.1-201ENST00000418535 575 ntBASIC17.26■□□□□ 0.35
ALPK3Q96L96 AL354877.1-201ENST00000424412 413 ntBASIC17.26■□□□□ 0.35
ALPK3Q96L96 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 RN7SL736P-201ENST00000613111 269 ntBASIC17.26■□□□□ 0.35
ALPK3Q96L96 CU633904.3-201ENST00000624042 1029 ntBASIC17.26■□□□□ 0.35
ALPK3Q96L96 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ALPK3Q96L96 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.26■□□□□ 0.35
ALPK3Q96L96 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 KRT18P25-201ENST00000508931 1278 ntBASIC17.25■□□□□ 0.35
ALPK3Q96L96 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 RN7SL774P-201ENST00000577467 290 ntBASIC17.25■□□□□ 0.35
ALPK3Q96L96 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 AL603756.1-201ENST00000606511 2163 ntBASIC17.25■□□□□ 0.35
ALPK3Q96L96 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.25■□□□□ 0.35
ALPK3Q96L96 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALPK3Q96L96 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.25■□□□□ 0.35
ALPK3Q96L96 AC243562.2-201ENST00000561247 970 ntBASIC17.25■□□□□ 0.35
ALPK3Q96L96 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms