Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 AL033527.5-202ENST00000641632 1098 ntBASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ECHDC3Q96DC8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 INGX-202ENST00000489074 768 ntBASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 AC009407.1-201ENST00000568958 598 ntBASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 AC079328.2-201ENST00000561241 3354 ntBASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ECHDC3Q96DC8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC011477.6-201ENST00000604980 1927 ntBASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC069224.1-201ENST00000566372 1715 ntBASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 RN7SL618P-201ENST00000477850 296 ntBASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 MIR6069-201ENST00000620069 79 ntBASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 AC022144.1-201ENST00000602255 1580 ntBASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ECHDC3Q96DC8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms