Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFWD2Q8NHY2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
RFWD2Q8NHY2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD2Q8NHY2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD2Q8NHY2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RFWD2Q8NHY2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 NUS1P2-201ENST00000417358 873 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 HCG4P8-203ENST00000443049 980 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 ABCD1P5-201ENST00000445663 754 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AC087163.2-201ENST00000457299 853 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 BX005266.1-201ENST00000473402 457 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AC012615.1-201ENST00000565797 1299 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AC114341.1-201ENST00000618070 349 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AL365209.1-201ENST00000624418 6473 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 TCAF2P1-201ENST00000291129 2421 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 AC087481.3-201ENST00000602886 1894 ntBASIC16.08■□□□□ 0.16
RFWD2Q8NHY2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 MIR600HG-201ENST00000449175 5984 ntBASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 AC091951.1-201ENST00000512854 2465 ntBASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RFWD2Q8NHY2 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RFWD2Q8NHY2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms