Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 AC233702.3-201ENST00000578656 1387 ntBASIC14.07□□□□□ -0.16
BEST4Q8NFU0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BEST4Q8NFU0 AL031731.1-201ENST00000642131 2094 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC007292.2-201ENST00000593524 1812 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 RCN1P2-201ENST00000398357 915 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AL590787.1-201ENST00000568856 1315 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AC117489.1-201ENST00000625169 3217 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 AL512652.2-201ENST00000625156 1716 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 TOP3BP1-201ENST00000420768 1380 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 SNX33P1-201ENST00000592116 1762 ntBASIC14.06□□□□□ -0.16
BEST4Q8NFU0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.06□□□□□ -0.16
BEST4Q8NFU0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms