Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PI4KAP1-204ENST00000612579 1703 ntBASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 TPM4P1-201ENST00000436100 807 ntBASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 AC021087.4-201ENST00000563761 564 ntBASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PIK3C3Q8NEB9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 AC016027.1-202ENST00000607927 1699 ntBASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 AL353732.1-201ENST00000569618 1459 ntBASIC15.27■□□□□ 0.03
PIK3C3Q8NEB9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 LAGE3P1-201ENST00000425356 484 ntBASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 FAM197Y8-203ENST00000450145 560 ntBASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 AF186996.4-201ENST00000467186 377 ntBASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 AC020765.3-201ENST00000613051 740 ntBASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 AL805961.1-202ENST00000641562 540 ntBASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PIK3C3Q8NEB9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 RPS2P28-201ENST00000314255 741 ntBASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.25■□□□□ 0.03
PIK3C3Q8NEB9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms