Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.6■□□□□ 0.41
VPS52Q8N1B4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VPS52Q8N1B4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 RPL37AP1-201ENST00000412502 279 ntBASIC17.59■□□□□ 0.41
VPS52Q8N1B4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 RNA5SP410-201ENST00000516285 106 ntBASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC009407.1-201ENST00000568958 598 ntBASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 AC013467.2-201ENST00000605472 835 ntBASIC17.59■□□□□ 0.41
VPS52Q8N1B4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VPS52Q8N1B4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 FLJ38576-201ENST00000623820 2459 ntBASIC17.58■□□□□ 0.41
VPS52Q8N1B4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VPS52Q8N1B4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 AC105021.1-202ENST00000570572 669 ntBASIC17.58■□□□□ 0.4
VPS52Q8N1B4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 AC008738.7-201ENST00000609744 511 ntBASIC17.58■□□□□ 0.4
VPS52Q8N1B4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.58■□□□□ 0.4
VPS52Q8N1B4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 PCDHA14-201ENST00000506751 2298 ntBASIC17.58■□□□□ 0.4
VPS52Q8N1B4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VPS52Q8N1B4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS52Q8N1B4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS52Q8N1B4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms