Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 AC005730.2-201ENST00000564549 1184 ntBASIC22.48■■□□□ 1.19
UBR1Q8IWV7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC22.48■■□□□ 1.19
UBR1Q8IWV7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 AC132938.4-201ENST00000623835 848 ntBASIC22.47■■□□□ 1.19
UBR1Q8IWV7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBR1Q8IWV7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 SPTLC1P5-201ENST00000450718 252 ntBASIC22.46■■□□□ 1.19
UBR1Q8IWV7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 AC018635.2-201ENST00000608625 364 ntBASIC22.46■■□□□ 1.19
UBR1Q8IWV7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 NEFHP1-201ENST00000412845 2629 ntBASIC22.46■■□□□ 1.19
UBR1Q8IWV7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBR1Q8IWV7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 CYP46A4P-201ENST00000414953 267 ntBASIC22.45■■□□□ 1.19
UBR1Q8IWV7 AC007274.2-201ENST00000421675 662 ntBASIC22.45■■□□□ 1.19
UBR1Q8IWV7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 AC245884.6-201ENST00000515672 1067 ntBASIC22.45■■□□□ 1.19
UBR1Q8IWV7 AC022217.1-201ENST00000521069 738 ntBASIC22.45■■□□□ 1.19
UBR1Q8IWV7 FGFR3P5-201ENST00000564496 886 ntBASIC22.45■■□□□ 1.19
UBR1Q8IWV7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
UBR1Q8IWV7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AC126915.1-201ENST00000522847 1038 ntBASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 MIR5572-201ENST00000583188 137 ntBASIC22.45■■□□□ 1.18
UBR1Q8IWV7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC22.45■■□□□ 1.18
UBR1Q8IWV7 AC092978.1-202ENST00000637590 1327 ntBASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms