Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.19■□□□□ 0.18
LDB1Q86U70 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.19■□□□□ 0.18
LDB1Q86U70 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 MIR648-201ENST00000385046 94 ntBASIC16.19■□□□□ 0.18
LDB1Q86U70 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.19■□□□□ 0.18
LDB1Q86U70 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 MTDHP5-201ENST00000598980 586 ntBASIC16.19■□□□□ 0.18
LDB1Q86U70 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.19■□□□□ 0.18
LDB1Q86U70 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.19■□□□□ 0.18
LDB1Q86U70 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LDB1Q86U70 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
LDB1Q86U70 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LDB1Q86U70 AKAP8P1-201ENST00000434743 1349 ntBASIC16.19■□□□□ 0.18
LDB1Q86U70 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.18■□□□□ 0.18
LDB1Q86U70 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.18■□□□□ 0.18
LDB1Q86U70 SPCS2P4-201ENST00000436160 681 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 SPDYE11-202ENST00000450699 704 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.18■□□□□ 0.18
LDB1Q86U70 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 AC079140.1-201ENST00000508039 487 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 SPDYE9P-201ENST00000570642 692 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
LDB1Q86U70 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.18■□□□□ 0.18
LDB1Q86U70 AC026120.1-201ENST00000611536 926 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 SPDYE10P-202ENST00000612005 668 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
LDB1Q86U70 SPDYE8P-202ENST00000612377 668 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 AC105917.1-201ENST00000506637 2539 ntBASIC16.18■□□□□ 0.18
LDB1Q86U70 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
LDB1Q86U70 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.18■□□□□ 0.18
LDB1Q86U70 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LDB1Q86U70 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms