Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 DUX4L45-201ENST00000566406 1057 ntBASIC20.18■□□□□ 0.82
SMIM5Q71RC9 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 MIR4741-201ENST00000579822 90 ntBASIC20.18■□□□□ 0.82
SMIM5Q71RC9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 AC008687.7-202ENST00000637404 953 ntBASIC20.18■□□□□ 0.82
SMIM5Q71RC9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 AC012313.1-201ENST00000593393 3059 ntBASIC20.18■□□□□ 0.82
SMIM5Q71RC9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMIM5Q71RC9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 TOMM22P5-201ENST00000416399 439 ntBASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AC079328.1-201ENST00000560358 952 ntBASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM5Q71RC9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 AC007969.1-201ENST00000433675 447 ntBASIC20.16■□□□□ 0.82
SMIM5Q71RC9 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 AC016629.1-201ENST00000596579 586 ntBASIC20.16■□□□□ 0.82
SMIM5Q71RC9 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC20.16■□□□□ 0.82
SMIM5Q71RC9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 LINC01144-201ENST00000626198 1710 ntBASIC20.16■□□□□ 0.82
SMIM5Q71RC9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM5Q71RC9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM5Q71RC9 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SMIM5Q71RC9 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SMIM5Q71RC9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM5Q71RC9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SMIM5Q71RC9 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM5Q71RC9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms