Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNKSR3Q6P9H4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNKSR3Q6P9H4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 MIR1247-201ENST00000408206 136 ntBASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 DUX4L45-201ENST00000566406 1057 ntBASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 AC244669.2-201ENST00000612320 853 ntBASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 AC009542.2-202ENST00000619004 1067 ntBASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 AC005915.1-201ENST00000624912 2018 ntBASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 MSTO2P-201ENST00000314835 1709 ntBASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNKSR3Q6P9H4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CNKSR3Q6P9H4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC009053.2-201ENST00000563701 2365 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC026954.1-201ENST00000429771 1293 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 PHKG1P2-201ENST00000457537 863 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 RPL13AP20-201ENST00000459725 609 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 RN7SL560P-201ENST00000577943 264 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 MIR3615-201ENST00000581999 87 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC139713.2-201ENST00000641328 2723 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 AC007613.1-201ENST00000572811 2597 ntBASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.2■□□□□ 0.34
CNKSR3Q6P9H4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 AC105020.1-201ENST00000435356 2205 ntBASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CNKSR3Q6P9H4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms