Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC011676.5-201ENST00000624864 2660 ntBASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13DQ5THJ4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 AC138028.6-201ENST00000616106 1482 ntBASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 SPCS2P2-201ENST00000603270 608 ntBASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 SPTLC1P5-201ENST00000450718 252 ntBASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 MIR3619-201ENST00000579667 83 ntBASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 ALOX12P2-203ENST00000570921 1945 ntBASIC10.65□□□□□ -0.7
VPS13DQ5THJ4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 AC104596.2-201ENST00000512793 793 ntBASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 MIR4741-201ENST00000579822 90 ntBASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 AC128714.1-201ENST00000637035 887 ntBASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13DQ5THJ4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AL645939.5-201ENST00000606834 243 ntBASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
VPS13DQ5THJ4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms