Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM71Q2Q1W2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 PDIA3P1-201ENST00000471856 1510 ntBASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRIM71Q2Q1W2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 TOMM22P5-201ENST00000416399 439 ntBASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 KRT43P-201ENST00000434019 910 ntBASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 UBALD1-205ENST00000590891 2641 ntBASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM71Q2Q1W2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 FAM86MP-201ENST00000340703 885 ntBASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM71Q2Q1W2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM71Q2Q1W2 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms